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searching siRNA sequence (19bp) against human genome
searching siRNA sequence
human genome
GenomicAlignment
Biostrings
matchPattern
updated 4.3 years ago by
ATpoint
★ 4.2k • written 4.3 years ago by
stephen66
▴ 50
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While exploring different providers on my favorite gaming platform, I stumbled upon the Igrosoft section at [https://slotscity.com/provider…
Comment: How to compare subset of samples from VCF files
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Gordon Smyth
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Welcome to Bioconductor support. Did you know that you can delete your old postings if they haven't received an answer yet? Instead of ap…
Comment: Gviz and custom database
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James W. MacDonald
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The vignette for `Gviz` says you can use a `DNAStringSet`, generated using `Biostrings`. Have you tried that?
Comment: Gviz and custom database
by
luigi.faino
• 0
Dear, this is not what I need. I need to transform a fasta sequence in a genome track usable in Gviz. L
Answer: Gviz and custom database
by
James W. MacDonald
66k
https://bioconductor.org/packages/release/bioc/vignettes/txdbmaker/inst/doc/txdbmaker.html
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Answer: Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)?
Answer: makeExampleDESeqDataSet using pilot data
Answer: Checking/updating package versions
Answer: Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)?
convert data frame of Entrez IDs to Gene Symbols
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